WebNov 1, 2024 · Ab initio protein structure prediction built on Tara genome sequences. There are currently 17,929 Pfam families in the Pfam database, where 5721 of them have no member with an experimentally solved structure [].Using hmmsearch, 2801 out of the 5721 Pfam families can have at least one member associated with the sequences in the Tara … http://ocean-microbiome.embl.de/companion.html
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WebInterrogation of the Tara Oceans database found that most LysA-like sequences (92%) are from Pseudomonadota, which are widely distributed in multiple habitats. This study provides an insight into DAP metabolism by marine bacteria in the ocean and contributes to our understanding of the mineralization and recycling of DAP by marine bacteria. WebFeb 29, 2016 · Here, we have explored the dataset generated by Tara Oceans from a wide range of oceanic regions to characterize diatom diversity patterns on a global scale. We confirm the dominance of diatoms as a major photosynthetic group and identify the most widespread and diverse genera. brewster\u0027s millions online free
Tara Oceans - Genoscope
WebMay 26, 2015 · Overall, Tara Oceans surveyed 210 ecosystems in 20 biogeographic provinces, collecting over 35,000 samples of seawater and plankton. Organising such a … WebJan 16, 2024 · Here, we present >2,000 additional draft genomes from the Bacteria and Archaea estimated to be >50% complete reconstructed from 102 billion metagenomic sequences generated from multiple size... WebTitle Description; Tara Oceans: The Tara Oceans expedition (Karsenti et al. 2011) has collected seawater samples from all over the globe. This umbrella project collects together the MGnify analyses of Tara Oceans microbiome datasets and derived data, including assembled datasets, offering in-depth insight into microbial life in the world’s oceans. county government of taita taveta tenders